Protein Alignment B52 and srsf1

DIOPT Version :9

• Sequence 1: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_001006919.1
• Gene: srsf1 / 448766
• XenbaseID: XB-GENE-486875
• Length: 267
• Species: Xenopus tropicalis
• Alignment Length: 267
• Identity: 121/267 - (45%)
• Similarity: 145/267 - (54%)
• Gaps: 27/267 - (10%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYG-----FVEFEDYRDADDAVYELNGKELLG 64
            |:|||.||..:|.:|:|..|..||..|||.:||..|     ||||||.|||:||||..:|.:..|
 Frog    17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDG 81

  Fly    65 ERVVVE-PARGT-ARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPP-LRTEYRLIVEN 126
            .|:.|| |..|. |.|..........||..|||||.............||||| .|:|||::|..
 Frog    82 YRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSG 146

  Fly   127 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL---NGRRIHL 188
            |....|||||||:||:||:|.|||..  |...|||||....||..|:.|||:|:.   .|...::
 Frog   147 LPPSGSWQDLKDHMREAGDVCYADVF--RDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYI 209

  Fly   189 VEDRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVK 253
            .....|.||            .|..|||||||.|||||..|:|||:|.|..:|||  |...||..
 Frog   210 RVKVDGPRS------------PSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRG--SPRYSPRH 260

  Fly   254 SRSRSRS 260
            ||||||:
 Frog   261 SRSRSRT 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	37/74 (50%)
		RRM2_SRSF4_like	120..191	CDD:241044	33/73 (45%)
srsf1	NP_001006919.1	RRM1_SRSF1	17..90	CDD:241041	36/72 (50%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	90..137		15/46 (33%)
		RRM2_SRSF1_like	140..212	CDD:241045	33/73 (45%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..267		33/68 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1390
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.940