Sequence 1: | NP_001014619.2 | Gene: | B52 / 41670 | FlyBaseID: | FBgn0004587 | Length: | 355 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001003875.1 | Gene: | snrnp70 / 445398 | ZFINID: | ZDB-GENE-040825-2 | Length: | 495 | Species: | Danio rerio |
Alignment Length: | 411 | Identity: | 104/411 - (25%) |
---|---|---|---|
Similarity: | 149/411 - (36%) | Gaps: | 115/411 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 VYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVYELNGKEL 62
Fly 63 LGERVVVEPARGTARGSNRDRYDDRYGGRRGG---GGGRYNEKNKNSRSSSRYGP-PLRTEYRLI 123
Fly 124 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHL 188
Fly 189 VEDRRGGRSGGG-----------GGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSR 242
Fly 243 G----------------------------------GRSKSKSPVKSRSRSRSRSNKSRDVSKSKS 273
Fly 274 KSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRSKSIHRDSRSRDRSASAENKSRSRSRSRSAS 338
Fly 339 PKNGNAS----PDRNNESMDD 355 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
B52 | NP_001014619.2 | RRM1_SRSF4_like | 5..74 | CDD:240783 | 24/75 (32%) |
RRM2_SRSF4_like | 120..191 | CDD:241044 | 8/70 (11%) | ||
snrnp70 | NP_001003875.1 | U1snRNP70_N | 2..>57 | CDD:289024 | |
RRM | <98..>182 | CDD:223796 | 25/76 (33%) | ||
RRM_snRNP70 | 102..187 | CDD:240682 | 26/81 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |