Protein Alignment B52 and srsf5b

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_001002610.1
• Gene: srsf5b / 436883
• ZFINID: ZDB-GENE-040718-354
• Length: 285
• Species: Danio rerio
• Alignment Length: 321
• Identity: 175/321 - (54%)
• Similarity: 207/321 - (64%)
• Gaps: 42/321 - (13%)

  Fly     1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGE 65
            |.|.|:::|.|....||:|:|||||||||.|||.:|.|:|||||:|.|||:||||||:||||..|
Zfish     1 MSGCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKELCNE 65

  Fly    66 RVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEK-NKNSRSSSRYGPPLRTEYRLIVENLSS 129
            ||.:|.||...|           |||..|||||:..: .:.|:.|.|..||:|||.|||||||||
Zfish    66 RVTIEHARVRLR-----------GGRGRGGGGRFPARYGRGSQDSRRNPPPMRTENRLIVENLSS 119

  Fly   130 RVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRG 194
            |||||||||:||||||||:||||:...|||||||||.||:|.|:|||...|:|||:|.|||
Zfish   120 RVSWQDLKDFMRQAGEVTFADAHRPNLNEGVVEFASHSDLKNALEKLSGKEINGRKIKLVE---- 180

  Fly   195 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRSR 259
                               .||.:||.||||..||.|||:.||.|:|| .||:|.|| ||.:|||
Zfish   181 -------------------ASRKKSRSRSRSNSSSRSRSRGRSASRSR-SRSRSHSP-KSHNRSR 224

  Fly   260 SRSNKSRDVSKSKSKSHSRTRSRSPKRERD----SRSRSRSVSKRESRSRSRSKSIHRDSR 316
            ||| :|...|..:.|...|..|.||.....    |||||||.|:..|||||||:|...|||
Zfish   225 SRS-RSASASPVRPKEAPRPESASPPASAQHPPRSRSRSRSRSRSRSRSRSRSRSPSTDSR 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	44/68 (65%)
		RRM2_SRSF4_like	120..191	CDD:410012	53/70 (76%)
srsf5b	NP_001002610.1	RRM1_SRSF5	5..74	CDD:410008	44/68 (65%)
		RRM2_SRSF5	101..181	CDD:410158	60/102 (59%)