Sequence 1: | NP_001014619.2 | Gene: | B52 / 41670 | FlyBaseID: | FBgn0004587 | Length: | 355 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005157471.1 | Gene: | srsf1a / 406288 | ZFINID: | ZDB-GENE-040426-1950 | Length: | 257 | Species: | Danio rerio |
Alignment Length: | 265 | Identity: | 122/265 - (46%) |
---|---|---|---|
Similarity: | 147/265 - (55%) | Gaps: | 32/265 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYG-----FVEFEDYRDADDAVYELNGKELLG 64
Fly 65 ERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPP-LRTEYRLIVENLS 128
Fly 129 SRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL---NGRRIHLVE 190
Fly 191 DRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSR 255
Fly 256 SRSRS 260 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
B52 | NP_001014619.2 | RRM1_SRSF4_like | 5..74 | CDD:240783 | 36/73 (49%) |
RRM2_SRSF4_like | 120..191 | CDD:241044 | 34/73 (47%) | ||
srsf1a | XP_005157471.1 | RRM | <7..>87 | CDD:223796 | 35/70 (50%) |
RRM1_SRSF1 | 16..89 | CDD:241041 | 36/72 (50%) | ||
RRM | <123..>189 | CDD:223796 | 37/67 (55%) | ||
RRM2_SRSF1_like | 130..202 | CDD:241045 | 34/73 (47%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000217 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |