Protein Alignment B52 and srsf1a

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_998180.2
• Gene: srsf1a / 406288
• ZFINID: ZDB-GENE-040426-1950
• Length: 257
• Species: Danio rerio
• Alignment Length: 265
• Identity: 122/265 - (46%)
• Similarity: 147/265 - (55%)
• Gaps: 32/265 - (12%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYG-----FVEFEDYRDADDAVYELNGKELLG 64
            |:|||.||..:|.:|:|..|..||..|||.:||..|     ||||||.|||:||||..:|.:..|
Zfish    16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDG 80

  Fly    65 ERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPP-LRTEYRLIVENLS 128
            .|:.||..| :.||..|..:....||..|||||      .......||||| .|:|||:||..|.
Zfish    81 YRLRVEFPR-SGRGMGRGGFGGGGGGGGGGGGG------GGGAPRGRYGPPSRRSEYRVIVSGLP 138

  Fly   129 SRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL---NGRRIHLVE 190
            ...|||||||:||:||:|.|||..  |...|||||....||..|:.|||:|:.   .|...::..
Zfish   139 PSGSWQDLKDHMREAGDVCYADVF--RDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV 201

  Fly   191 DRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSR 255
            ...|.||            .|..|||||||.|||||..|::||:|.|..:|||  |...||..||
Zfish   202 KVDGPRS------------PSYGRSRSRSRSRSRSRSRSNNRSRSYSPRRSRG--SPQYSPRHSR 252

  Fly   256 SRSRS 260
            |||||
Zfish   253 SRSRS 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	36/73 (49%)
		RRM2_SRSF4_like	120..191	CDD:410012	34/73 (47%)
srsf1a	NP_998180.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	94..126		13/37 (35%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	202..257		32/68 (47%)