Protein Alignment B52 and rbm4.3

DIOPT Version :9

• Sequence 1: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: XP_005172323.1
• Gene: rbm4.3 / 406277
• ZFINID: ZDB-GENE-040426-1938
• Length: 362
• Species: Danio rerio
• Alignment Length: 381
• Identity: 74/381 - (19%)
• Similarity: 109/381 - (28%)
• Gaps: 139/381 - (36%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 69
            ::::|.||......:|:..|..||...:..|...:.||..:|.:.|..|:..|:..:|.|..:.|
Zfish    24 KIFIGNLPQQAEVDELKSLFSQYGTVTECAIIKNFAFVHMDDRKSATKAIKNLHLYKLHGTPINV 88

  Fly    70 EPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQ 134
            |.:||                           ||:        ||     .:|.|.|:..... .
Zfish    89 EASRG---------------------------KNQ--------GP-----VKLHVANVEKGTD-D 112

  Fly   135 DLKDYMRQAGEV-------TYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDR 192
            :|:......|.|       .:|..|....:|.:          .||:.||:||..|:|||:
Zfish   113 ELRALFEDYGTVAECAIIKNFAFVHMNNSDEAM----------DAIKGLDNTEFQGKRIHV---- 163

  Fly   193 RGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSR--------RSSHSRSKSRSRSKSRGGRSKSK 249
                              ..|:||.|........        |....|.:.....:.|.|.....
Zfish   164 ------------------QISKSRPRGEEDDYGHPDAGYWPPRYPGERPEPPGYPRGRYGYPPGP 210

  Fly   250 SPVKSRSRSRSRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRSKSIHRD 314
            .|.......|                    ||..|.|...:..|.|.|.....:.|:|...:..|
Zfish   211 PPPPPPPPPR--------------------RSPYPDRAAPAYERQRDVVDYYEKYRARPYGVAYD 255

  Fly   315 SR----------------SRDRSAS---------------AENKSRSRSRSRSASP 339
            .|                .|||...               |...:|.||..|.|.|
Zfish   256 DRRPGGIPPPPPPPSSAIMRDRMPGNGLDPYERRPLPPPPASFYARDRSPIRRAPP 311

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	18/68 (26%)
		RRM2_SRSF4_like	120..191	CDD:241044	19/77 (25%)
rbm4.3	XP_005172323.1	RRM_SF	23..89	CDD:302621	16/64 (25%)
		RRM_SF	100..164	CDD:302621	19/96 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910