Protein Alignment B52 and srsf9

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_998064.2
• Gene: srsf9 / 405835
• ZFINID: ZDB-GENE-040426-2397
• Length: 245
• Species: Danio rerio
• Alignment Length: 267
• Identity: 106/267 - (39%)
• Similarity: 141/267 - (52%)
• Gaps: 40/267 - (14%)

  Fly     1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNG-----YGFVEFEDYRDADDAVYELNGK 60
            |...|:|||.||..|:|||:|..|..||:.|||.:||.     :.||.|||.|||:|||:..||.
Zfish     1 MSDGRIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65

  Fly    61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPL-RTEYRLIV 124
            .....::.||..|.:  ||       ::.|..|||||        .....|:|||. |:|:|:||
Zfish    66 GFGDCKLRVEYPRSS--GS-------KFSGPAGGGGG--------GGPRGRFGPPTRRSEFRVIV 113

  Fly   125 ENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRR---- 185
            ..|....|||||||:||:||:|.:||.  ||..||||||....||:.|:.:||.||....:
Zfish   114 TGLPPTGSWQDLKDHMREAGDVCFADV--QRDGEGVVEFLRREDMEYALRRLDSTEFRSHQGETA 176

  Fly   186 -IHLVEDRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSK 249
             |.::|:|         |:..|||| |.||||.|.....:||.|...|.:|..|..:|......:
Zfish   177 YIRVMEER---------GTSWGRSR-SRSRSRGRYTPPYQSRGSPPPRYRSPPRHMTRHSPPSRR 231

  Fly   250 SPVKSRS 256
            .|::..|
Zfish   232 PPLQHHS 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	34/73 (47%)
		RRM2_SRSF4_like	120..191	CDD:410012	34/75 (45%)
srsf9	NP_998064.2	RRM1_SRSF9	5..76	CDD:241042	33/70 (47%)
		RRM2_SRSF1_like	109..182	CDD:410013	34/74 (46%)