Protein Alignment B52 and Rbp6

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Alignment Length: 330
• Identity: 61/330 - (18%)
• Similarity: 112/330 - (33%)
• Gaps: 96/330 - (29%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDAD----DAVYEL 57
            ::::|||.:......|..:|..||...:.::        ..|:|||.|.|....|    ...:||
  Fly    30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHEL 94

  Fly    58 NGKELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRL 122
            :||::  :..|..|.|...:...|.:                                     ::
  Fly    95 DGKKV--DPKVAFPRRAHPKMVTRTK-------------------------------------KI 120

  Fly   123 IVENLSSRVSWQDLKDYMRQAGEVTYA----DAHKQR-RNEGVVEFASLSDMKTAIEKLDDTELN 182
            .|..||:..:.:|:|.|..|.|.:..|    |....| |..|.|.|.| .|:...:.::...|:|
  Fly   121 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQS-EDVVDKVCEIHFHEIN 184

  Fly   183 GRRI--------------HLVEDRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRS 233
            .:.:              :|.:.|..|||..|.....|                     |||:.|
  Fly   185 NKMVECKKAQPKEVMLPANLAKTRAAGRSAYGELVVWG---------------------SSHAHS 228

  Fly   234 KSRSRSKSRGGRSKSKSPVKSRSRSRSRSNKSRDVSKSKSKSHSR----TRSRSPKRERDSRSRS 294
            .:.:.:.:.|....|.:...|..:.:.:..:.:...:.:.:.|.:    |..:||.........:
  Fly   229 TAATSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQQQQQQQQHHQQLHHTHPQSPAHSHAHHPHT 293

  Fly   295 RSVSK 299
            .|.|:
  Fly   294 HSHSQ 298

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	20/80 (25%)
		RRM2_SRSF4_like	120..191	CDD:410012	20/89 (22%)
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	19/76 (25%)
		RRM2_MSI	119..192	CDD:240769	19/73 (26%)