Protein Alignment B52 and srsf1b

DIOPT Version :9

• Sequence 1: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_956887.2
• Gene: srsf1b / 393565
• ZFINID: ZDB-GENE-040426-1467
• Length: 245
• Species: Danio rerio
• Alignment Length: 266
• Identity: 122/266 - (45%)
• Similarity: 145/266 - (54%)
• Gaps: 46/266 - (17%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYG-----FVEFEDYRDADDAVYELNGKELLG 64
            |:|||.||..:|.:|:|..|..||..|||.:||..|     ||||||.|||:||||..:|.:..|
Zfish    16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDG 80

  Fly    65 ERVVVE-PARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPP-LRTEYRLIVENL 127
            .|:.|| |..|            |.|||.|||||......      .||||| .|:|||:||..|
Zfish    81 YRLRVEFPRSG------------RGGGRGGGGGGGVGAPR------GRYGPPSRRSEYRVIVSGL 127

  Fly   128 SSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL---NGRRIHLV 189
            ....|||||||:||:||:|.|||..  |...|||||....||..|:.|||:|:.   .|...::.
Zfish   128 PPSGSWQDLKDHMREAGDVCYADVF--RDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIR 190

  Fly   190 EDRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 254
            ....|.||            .|..|||||||.|||||  |:|||:|.|..:|||  |...||..|
Zfish   191 VKVDGPRS------------PSYGRSRSRSRSRSRSR--SNSRSRSYSPRRSRG--SPRYSPRHS 239

  Fly   255 RSRSRS 260
            |||||:
Zfish   240 RSRSRT 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	37/74 (50%)
		RRM2_SRSF4_like	120..191	CDD:241044	34/73 (47%)
srsf1b	NP_956887.2	RRM	<7..>87	CDD:223796	35/70 (50%)
		RRM1_SRSF1	16..89	CDD:241041	36/72 (50%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	89..116		15/44 (34%)
		RRM2_SRSF1_like	120..192	CDD:241045	34/73 (47%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	192..245		33/68 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1390
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.940