Protein Alignment B52 and Srsf3

DIOPT Version :9

• Sequence 1: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_001041372.1
• Gene: Srsf3 / 361814
• RGDID: 1309233
• Length: 164
• Species: Rattus norvegicus
• Alignment Length: 287
• Identity: 77/287 - (26%)
• Similarity: 93/287 - (32%)
• Gaps: 137/287 - (47%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGKELLGER 66
            :||||.|.....:.:|||.|..||..|.:.:..   |:.||||||.|||.|||.||:|:.|.|.|
  Rat    11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCR 75

  Fly    67 VVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRV 131
            |.||.:.|..|..||                               |||               .
  Rat    76 VRVELSNGEKRSRNR-------------------------------GPP---------------P 94

  Fly   132 SWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRGGR 196
            ||
  Rat    95 SW--------------------------------------------------------------- 96

  Fly   197 SGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRSRSR 261
                     ||......|.||...||...||.|.|||:|||.|:.|.         :.||.||.|
  Rat    97 ---------GRRPRDDYRRRSPPPRRRSPRRRSFSRSRSRSLSRDRR---------RERSLSRER 143

  Fly   262 SNKSRDVSKSKSKSHSRTRSRSPKRER 288
            ::|       .|:|.||:||||...||
  Rat   144 NHK-------PSRSFSRSRSRSRSNER 163

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	34/71 (48%)
		RRM2_SRSF4_like	120..191	CDD:241044	2/70 (3%)
Srsf3	NP_001041372.1	RRM_SRSF3	6..86	CDD:241089	35/74 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910