Protein Alignment B52 and CG12288

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Alignment Length: 330
• Identity: 63/330 - (19%)
• Similarity: 123/330 - (37%)
• Gaps: 89/330 - (26%)

  Fly     4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYG-----------------FVEFEDYRDAD 51
            |.|:||.||...:...|.:.|:.||..:.|.::...|                 :|..|....|.
  Fly   155 STVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVLEKPEIAQ 219

  Fly    52 DAVYELNGKELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPL 116
            .|: .|||.|.....:.|.||      |..:::            |:..:|..:.:.:.|
  Fly   220 QAL-ALNGSEFKENHLRVTPA------SMAEKF------------GQAKDKQPSDKDAKR----- 260

  Fly   117 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTY----ADAHKQRRNEGVVEFASLSDMKTAIE--- 174
                .:.|.:|....:.:.|::.....||:.|    .|..|..:....|.|.....:..|:|
  Fly   261 ----TIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALELNQ 321

  Fly   175 -KLDDTELNGRRIHL-------VEDRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHS 231
             .|||..:|..|..:       |.|                :.::|:.|::.|:.:::::.|:.:
  Fly   322 TLLDDRPINVERYQVKKLGAKQVRD----------------AAAASAASKTSSKTKAKNQNSAGA 370

  Fly   232 RSK-SRSRSKSRGGRSKSKSPVKSRSRSRSRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSR 295
            :.: .:.:.|..|...|..:|...:.:|..|..|...:.|:|          .||::  |..:..
  Fly   371 KKRLDKKKGKENGSLKKEGAPTGQKKKSEYRGVKVDGIKKAK----------KPKKK--SNDQQT 423

  Fly   296 SVSKR 300
            :::|:
  Fly   424 ALAKK 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	22/85 (26%)
		RRM2_SRSF4_like	120..191	CDD:410012	18/85 (21%)
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	19/81 (23%)
		RRM_SF	261..332	CDD:473069	16/70 (23%)