Protein Alignment B52 and srsf5a

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_957161.1
• Gene: srsf5a / 335396
• ZFINID: ZDB-GENE-030131-7336
• Length: 259
• Species: Danio rerio
• Alignment Length: 273
• Identity: 164/273 - (60%)
• Similarity: 195/273 - (71%)
• Gaps: 32/273 - (11%)

  Fly     1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGE 65
            |.|.||::|.|....||||:|:|||||||.|:|.:|||:|||||:|||||||||||||||||..|
Zfish     1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDYRDADDAVYELNGKELCSE 65

  Fly    66 RVVVEPARGTARGSNRDRYDDRYGGRRGGG---GGRYNEK---NKNSRS-SSRYGPPLRTEYRLI 123
            ||.:|.|| :.||             ||||   |||::.:   .:.||| .||||||:|||:|:|
Zfish    66 RVTIEHAR-SRRG-------------RGGGPGMGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRII 116

  Fly   124 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHL 188
            |||||||:|||||||.||:.||||:.|||:.::|||||||||.||||.||||||.|:||||::.|
Zfish   117 VENLSSRISWQDLKDLMRKVGEVTFVDAHRTKKNEGVVEFASHSDMKNAIEKLDGTDLNGRKLKL 181

  Fly   189 VEDRRGGRSGGGGGSGRGRSRS-SSSRSRSRSRRRSRSRRSSHSRSKSRSRS---KSRGGRSKSK 249
            .|||:..||       |.|||| |||||||.||.||..|.|..|||:|.||:   ||...||.|:
Zfish   182 YEDRKRNRS-------RSRSRSRSSSRSRSPSRSRSPERGSKRSRSRSLSRTPEKKSTSNRSPSR 239

  Fly   250 SPVKSRSRSRSRS 262
            ||...|.:|||||
Zfish   240 SPTPQRKQSRSRS 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	48/68 (71%)
		RRM2_SRSF4_like	120..191	CDD:410012	50/70 (71%)
srsf5a	NP_957161.1	RRM1_SRSF4_like	5..72	CDD:409774	47/66 (71%)
		RRM2_SRSF4_like	113..184	CDD:410012	50/70 (71%)