Protein Alignment B52 and srsf2b

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_955945.2
• Gene: srsf2b / 323700
• ZFINID: ZDB-GENE-030131-2420
• Length: 220
• Species: Danio rerio
• Alignment Length: 304
• Identity: 104/304 - (34%)
• Similarity: 123/304 - (40%)
• Gaps: 123/304 - (40%)

  Fly     8 VGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVYELNGKELLG 64
            |..|.|......|.|.|:.|||..|:.|        ..|:.||.|.|.|||:||:..::|..|.|
Zfish    18 VDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAILDG 82

  Fly    65 ERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSS 129
            ..:.|:.||   .|...|.|   ||   |||||
Zfish    83 RELRVQMAR---YGRPPDSY---YG---GGGGG-------------------------------- 106

  Fly   130 RVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRG 194
                                                                          |||
Zfish   107 --------------------------------------------------------------RRG 109

  Fly   195 GRSGGGGGS---GRGRSRSSSSRSRSRSRRRSRSRRSSHSR-SKSRSRSKSRGGRSKSKSPVKSR 255
              |||||||   |..||||...|.|||||.|||||..|.|| |:|||||.|| .||||.:|.|.:
Zfish   110 --SGGGGGSRRHGARRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSRSRSYSR-SRSKSHTPNKRK 171

  Fly   256 SRSRSRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSK 299
            |:|.|||.     |:|:|||.||:|||:|...|:|||||:|..|
Zfish   172 SKSPSRSR-----SRSRSKSRSRSRSRTPASNRESRSRSKSAPK 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	26/73 (36%)
		RRM2_SRSF4_like	120..191	CDD:410012	0/70 (0%)
srsf2b	NP_955945.2	RRM_SRSF2_SRSF8	16..88	CDD:409751	24/69 (35%)