Protein Alignment B52 and Rbp1-like

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_001188585.1
• Gene: Rbp1-like / 32293
• FlyBaseID: FBgn0030479
• Length: 247
• Species: Drosophila melanogaster
• Alignment Length: 291
• Identity: 65/291 - (22%)
• Similarity: 105/291 - (36%)
• Gaps: 106/291 - (36%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGKELLGER 66
            :||||.|.....:.::|..|..||..|::.:..   |:.||||||.|||:||...|:|....|.|
  Fly    12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTR 76

  Fly    67 VVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRV 131
            :.||.:.|      |.|.....||..|||||......:...|.:|.|
  Fly    77 IRVEMSSG------RSREGRGGGGGGGGGGGGSGGGGRGGGSGARAG------------------ 117

  Fly   132 SWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRGGR 196
                                                                         .|||
  Fly   118 -------------------------------------------------------------GGGR 121

  Fly   197 SGGGGGSGRGRSRSSSSRSRSRSRRRSRS--------RRSSHSRSKSRSRSKSRGGRSKSKSPVK 253
            :|.|||..|.:|.||::.|.:|:...:.|        :|::..:.|:.:.:.:|    .|.:|:.
  Fly   122 AGDGGGRYRIKSSSSTTTSTTRTTTTTTSIIIIIMIIKRTTKKKEKTTTATTTR----TSTTPLP 182

  Fly   254 SRSRSRSRSNKSRDVSKSKSKSHSRTRSRSP 284
            |.:.::      |..:.:.:::.|.|...:|
  Fly   183 STTTTK------RTTTTATTRTTSTTADPAP 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	28/71 (39%)
		RRM2_SRSF4_like	120..191	CDD:410012	0/70 (0%)
Rbp1-like	NP_001188585.1	RRM_SRSF3_like	12..81	CDD:409808	27/68 (40%)