Sequence 1: | NP_001014619.2 | Gene: | B52 / 41670 | FlyBaseID: | FBgn0004587 | Length: | 355 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006236890.1 | Gene: | Tia1 / 312510 | RGDID: | 1305742 | Length: | 387 | Species: | Rattus norvegicus |
Alignment Length: | 195 | Identity: | 47/195 - (24%) |
---|---|---|---|
Similarity: | 82/195 - (42%) | Gaps: | 39/195 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 VYVGGLPYGVRERDLERFFKGYGRTRDILI-------KNGYGFVEFEDYRDADDAVYELNGKELL 63
Fly 64 GERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTE--YRLIVEN 126
Fly 127 LSSRVSWQDLKDYMRQAGEVTYADAHK-----QRRNEGVVEFASLSDMKTAIEKLDDTELNGRRI 186
Fly 187 186 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
B52 | NP_001014619.2 | RRM1_SRSF4_like | 5..74 | CDD:240783 | 22/74 (30%) |
RRM2_SRSF4_like | 120..191 | CDD:241044 | 18/72 (25%) | ||
Tia1 | XP_006236890.1 | ELAV_HUD_SF | 6..281 | CDD:273741 | 47/195 (24%) |
RRM_SF | 8..82 | CDD:302621 | 21/72 (29%) | ||
RRM2_TIA1 | 106..185 | CDD:241062 | 18/73 (25%) | ||
RRM3_TIAR | 215..287 | CDD:241064 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |