Protein Alignment B52 and Tia1

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: XP_063142135.1
• Gene: Tia1 / 312510
• RGDID: 1305742
• Length: 398
• Species: Rattus norvegicus
• Alignment Length: 195
• Identity: 47/195 - (24%)
• Similarity: 82/195 - (42%)
• Gaps: 39/195 - (20%)

  Fly     6 VYVGGLPYGVRERDLERFFKGYGRTRDILI-------KNGYGFVEFEDYRDADDAVYELNGKELL 63
            :|||.|...|.|..:.:.|...|..::..:       .:.|.||||.::|.|..|:..:||::::
  Rat     9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDQTAGNDPYCFVEFHEHRHAAAALAAMNGRKIM 73

  Fly    64 GERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTE--YRLIVEN 126
            |:.|.|..|  |...|                       .|...|||......|::  :.:.|.:
  Rat    74 GKEVKVNWA--TTPSS-----------------------QKKDTSSSTVVSTQRSQDHFHVFVGD 113

  Fly   127 LSSRVSWQDLKDYMRQAGEVTYADAHK-----QRRNEGVVEFASLSDMKTAIEKLDDTELNGRRI 186
            ||..::.:|:|......|.::.|...|     :.:..|.|.|.:..|.:.||:::....|.||:|
  Rat   114 LSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 178

  Fly   187  186
              Rat   179  178

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	22/74 (30%)
		RRM2_SRSF4_like	120..191	CDD:410012	18/72 (25%)
Tia1	XP_063142135.1	None