Protein Alignment B52 and Srsf12

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: XP_038965360.2
• Gene: Srsf12 / 297962
• RGDID: 1561162
• Length: 358
• Species: Rattus norvegicus
• Alignment Length: 328
• Identity: 85/328 - (25%)
• Similarity: 126/328 - (38%)
• Gaps: 124/328 - (37%)

  Fly     6 VYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVYELNGKEL 62
            ::|..:....|..||.|.|..||...|:.|        ..|:.:|:|||.|||:||:|.||.|.:
  Rat   129 LFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQFEDVRDAEDALYNLNRKWV 193

  Fly    63 LGERVVVEPARGTARGSNRDRYDDRY-----GGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRL 122
            .|.::.::.|:|..:...:.:..:|:     ..||....   :::...||||
  Rat   194 CGRQIEIQFAQGDRKTPGQMKSKERHLCSPSDHRRSRSP---SQRRSRSRSS------------- 242

  Fly   123 IVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIH 187
                     ||
  Rat   243 ---------SW------------------------------------------------------ 244

  Fly   188 LVEDRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRS-RRSSHSRSKSRSRSKSRGGRSKSKSP 251
                            ||.|.||.|.:.:|.|.|:||: ||:|.||  .||||||...||
  Rat   245 ----------------GRDRRRSDSLKEQSTSARQSRTPRRNSGSR--GRSRSKSLPKRS----- 286

  Fly   252 VKSRSRSRSRSNKSRDVSKSKSKSHSR-----TRS--RSPKRERDSRSRSRSVSKRESRSRSRSK 309
             ||..:|:|||.:.:.||.:|.:||.|     .||  :||:....|.|::::......||.|||:
  Rat   287 -KSMEKSQSRSPQKQTVSGAKPRSHGRHCDSIARSPCKSPRGYASSGSKTQTTKHSHFRSHSRSR 350

  Fly   310 SIH 312
            |.|
  Rat   351 SYH 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	26/75 (35%)
		RRM2_SRSF4_like	120..191	CDD:410012	2/70 (3%)
Srsf12	XP_038965360.2	None