Protein Alignment B52 and Srsf5

DIOPT Version :9

• Sequence 1: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: XP_038967784.1
• Gene: Srsf5 / 29667
• RGDID: 3664
• Length: 270
• Species: Rattus norvegicus
• Alignment Length: 313
• Identity: 177/313 - (56%)
• Similarity: 207/313 - (66%)
• Gaps: 49/313 - (15%)

  Fly     1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGE 65
            |.|.||::|.|....||:|:|||||||||.|||.:|.|:|||||||.||||||||||:||||..|
  Rat     1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSE 65

  Fly    66 RVVVEPARGTARGS-NRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSS 129
            ||.:|.||..:||. .|.||.||:..||             .|:..|..||:|||.|||||||||
  Rat    66 RVTIEHARARSRGGRGRGRYSDRFSSRR-------------PRNDRRNAPPVRTENRLIVENLSS 117

  Fly   130 RVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRG 194
            |||||||||:||||||||:||||:.:.|||||||||..|:|.|||||...|:|||:|.|:|
  Rat   118 RVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE---- 178

  Fly   195 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRSR 259
                   ||.|        .||||||.|||:|.||.|||:||||      ||||.|  :||||||
  Rat   179 -------GSKR--------HSRSRSRSRSRTRSSSRSRSRSRSR------RSKSYS--RSRSRSR 220

  Fly   260 SRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRS-RSVSKRESRSRSRSKSI 311
            ||       |||:|.|.|....:|.||...|||:| .||.::.|||||||:|:
  Rat   221 SR-------SKSRSGSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSV 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	47/68 (69%)
		RRM2_SRSF4_like	120..191	CDD:241044	52/70 (74%)
Srsf5	XP_038967784.1	RRM1_SRSF5	5..74	CDD:410008	47/68 (69%)
		RRM2_SRSF5	99..179	CDD:410158	59/90 (66%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	98	1.000	Domainoid score	I6994
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1315388at2759
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_101955
Panther	1	1.100	-	-	O	PTHR23147
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X517
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	9	8.820