Protein Alignment B52 and srp2

DIOPT Version :9

• Sequence 1: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_594570.1
• Gene: srp2 / 2542772
• PomBaseID: SPAC16.02c
• Length: 365
• Species: Schizosaccharomyces pombe
• Alignment Length: 359
• Identity: 124/359 - (34%)
• Similarity: 174/359 - (48%)
• Gaps: 39/359 - (10%)

  Fly     1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGE 65
            |..:|::||.:|......|:..||||||:..|..:.||:||||.||.|||.|.|.:..|||.:|.
pombe     1 MSETRLFVGRIPPQATREDMMDFFKGYGQILDCKLMNGFGFVEVEDARDARDIVNDFQGKEFMGS 65

  Fly    66 RVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSR 130
            |:|||||||..|             ||         :|....::|:|..|.||.:||||||||..
pombe    66 RIVVEPARGERR-------------RR---------ENFRESAASKYPRPRRTGFRLIVENLSED 108

  Fly   131 VSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRGG 195
            ||||||||.||:|||.|:.|||::....|||||::..||:.|:..|:...:.|:.:.|.||....
pombe   109 VSWQDLKDVMRKAGEPTFTDAHRENPGAGVVEFSTEEDMRNALTSLNGEVIKGQAVTLREDPDAA 173

  Fly   196 RSGGGGGSGRGRSRSSSSRSRSRS--RRRSRSRRSSHSRSKSRSRSKSRGG--RSKSKSPVKSRS 256
            .........|.||||..:|.|.|.  ||....||.::...:...|..:..|  |..::...:...
pombe   174 NEPLPEVPSRFRSRSPPARRRYRDDYRRGGDYRRDAYRPGRDDERRYAPRGEYRRNNRDEYRRGG 238

  Fly   257 RSRSRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRSKSIHRDSRSRDRS 321
            |...|.|...|..:.....:.|.|....:..||          ...|||...:..|.|...||..
pombe   239 RDEYRRNSRSDYRRPHDDEYRRPRGDEYRPGRD----------EYRRSRDDGRPSHDDEYRRDAY 293

  Fly   322 ASAENKSRSRSRSRSAS---PKNGNASPDRNNES 352
            :.:.:..|.|..:||.:   .|:.:|:|:.:.||
pombe   294 SRSPSPRRDREENRSPAYEGSKSYSAAPEASMES 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	35/68 (51%)
		RRM2_SRSF4_like	120..191	CDD:241044	36/70 (51%)
srp2	NP_594570.1	RRM	2..278	CDD:223796	109/307 (36%)
		RRM_SF	5..69	CDD:302621	30/63 (48%)
		RRM2_SRSF4_like	98..169	CDD:241044	36/70 (51%)
		DUF1777	231..>342	CDD:285811	24/107 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	73	1.000	Domainoid score	I2557
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	179	1.000	Inparanoid score	I1135
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	1	1.000	-	-		oto101986
orthoMCL	1	0.900	-	-		OOG6_101955
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1390
SonicParanoid	1	1.000	-	-		X517
TreeFam	1	0.960	-	-
	11	10.750