Protein Alignment B52 and hrb1

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_594207.3
• Gene: hrb1 / 2542567
• PomBaseID: SPAC328.05
• Length: 464
• Species: Schizosaccharomyces pombe
• Alignment Length: 199
• Identity: 59/199 - (29%)
• Similarity: 86/199 - (43%)
• Gaps: 32/199 - (16%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKN-------GYGFVEFEDYRDADDAVYELNGKEL 62
            |||||.|.|.||..:|:.|....|...:..|.|       |...:|:....:|..|:..|:.::.
pombe    78 RVYVGNLSYQVRWFELKEFMGQVGNVLNCEILNLPNGLSKGCAIIEYSTAEEARTAIKTLSNQKF 142

  Fly    63 LGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENL 127
            :|..|.:.              :||....|.|       .:..|.|:|..|.....:.:|.|.||
pombe   143 MGRLVYIR--------------EDREQNARFG-------SSSVSPSASSNGKDSEPDRQLFVGNL 186

  Fly   128 SSRVSWQDLKDYMRQAGEVTYADAHKQR----RNEGVVEFASLSDMKTAIEKLDDTELNGRRIHL 188
            ...|.||||||..||||.|..||....:    |..|:|..:|:.:...||:.|.:|:..||.:.:
pombe   187 PYNVRWQDLKDLFRQAGSVIRADIQMNQEGRSRGIGIVVMSSMKEAMHAIQMLHNTDFMGRTLEV 251

  Fly   189 VEDR 192
            ..||
pombe   252 RLDR 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	21/75 (28%)
		RRM2_SRSF4_like	120..191	CDD:410012	28/74 (38%)
hrb1	NP_594207.3	PABP-1234	62..>385	CDD:130689	59/199 (30%)