Protein Alignment B52 and tcg1

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_595090.2
• Gene: tcg1 / 2541062
• PomBaseID: SPBC660.11
• Length: 349
• Species: Schizosaccharomyces pombe
• Alignment Length: 356
• Identity: 74/356 - (20%)
• Similarity: 116/356 - (32%)
• Gaps: 127/356 - (35%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDI------------LIKNGYGFVEFEDYRDADDAVYEL 57
            ||:||.|....::.::...|:..|..|.:            |:.:|..||.|.:..|.|.|:..|
pombe    46 RVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDKAIETL 110

  Fly    58 NGKELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRL 122
            |||.|....:||:.||.......:|               |...||||...     |...|.
pombe   111 NGKTLDDREIVVQKARPVQEQPIKD---------------RKKSKNKNGEE-----PETSTS--- 152

  Fly   123 IVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIH 187
             |||..|.....|                    .||.....|..|:           |.||
pombe   153 -VENAESAKGSSD--------------------ENEANTATAPSSN-----------EANG---- 181

  Fly   188 LVEDRRGGRSGGGGGSGRGRSRS---------------------------SSSRSR--------- 216
              .|::.....|.||||:.:::.                           :.:|:|
pombe   182 --VDKKQNEIKGKGGSGKNKAKPLPPNSIYVSGLSVTLTNEGLKEMFDAYNPTRARIAVRSLPPY 244

  Fly   217 --SRSRRRSRSRRS------SHSRSKSRSRS-KSRGGRSKS------KSPV--KSRSRSRSRSNK 264
              .|.:.|...||.      |.:.::.:||: :...|:...      ||.|  :.:....:..|:
pombe   245 IIRRIKLRGEQRRGRGFGFVSFANAEDQSRAIEEMNGKQVGDLTLVVKSAVFREDKQNDENEKNE 309

  Fly   265 SRDVSKSKSKSHSRTRSRSPK-RERDSRSRS 294
            :..:..|:|...:.:.|..|| .|.||..:|
pombe   310 NEPIEASESAPTNVSDSTEPKASEVDSEEKS 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	24/80 (30%)
		RRM2_SRSF4_like	120..191	CDD:410012	12/70 (17%)
tcg1	NP_595090.2	PABP-1234	<33..>300	CDD:130689	64/314 (20%)