DRSC/TRiP Functional Genomics Resources

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Protein Alignment B52 and Srsf7

DIOPT Version :10

Sequence 1:NP_788671.2 Gene:B52 / 41670 FlyBaseID:FBgn0004587 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_666195.1 Gene:Srsf7 / 225027 MGIID:1926232 Length:238 Species:Mus musculus


Alignment Length:350 Identity:120/350 - (34%)
Similarity:146/350 - (41%) Gaps:129/350 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGKELLGE 65
            ::||||.|..|..:.:|||.|..||..|.:.|..   |:.||||||.|||:|||..|:||.:.|.
Mouse    11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGS 75

  Fly    66 RVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSR 130
            ||.||.:.|..|.|..||                              ||.|..:          
Mouse    76 RVRVELSTGMPRRSRFDR------------------------------PPARRPF---------- 100

  Fly   131 VSWQDLKDYMRQAGEV-TYA-DAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRR 193
                |..|...:.||. .|| |.|:.                                       
Mouse   101 ----DPNDRCYECGEKGHYAYDCHRY--------------------------------------- 122

  Fly   194 GGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRS 258
                          ||...|||||||..|||.||      .|||||:|||.||:|.||.:|||.|
Mouse   123 --------------SRRRRSRSRSRSHSRSRGRR------YSRSRSRSRGRRSRSASPRRSRSVS 167

  Fly   259 RSRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRSKSIHRDSRSRDRSAS 323
                     :.:|:|.|..|:||.|....|..:||||      |||||||.|..|.|||:.||.|
Mouse   168 ---------LRRSRSASLRRSRSGSIIGSRYFQSRSR------SRSRSRSISRPRSSRSKSRSPS 217

  Fly   324 AENKSRSRSRSRSASPKNGNASPDR 348
            .:     ||||.|.|| :.:|||:|
Mouse   218 PK-----RSRSPSGSP-HRSASPER 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B52NP_788671.2 RRM1_SRSF4_like 5..74 CDD:409774 35/71 (49%)
RRM2_SRSF4_like 120..191 CDD:410012 8/72 (11%)
Srsf7NP_666195.1 RRM_SRSF7 12..88 CDD:410050 36/75 (48%)

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