Sequence 1: | NP_001014619.2 | Gene: | B52 / 41670 | FlyBaseID: | FBgn0004587 | Length: | 355 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033250.3 | Gene: | Snrnp70 / 20637 | MGIID: | 98341 | Length: | 448 | Species: | Mus musculus |
Alignment Length: | 409 | Identity: | 93/409 - (22%) |
---|---|---|---|
Similarity: | 128/409 - (31%) | Gaps: | 157/409 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 VYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVYELNGKEL 62
Fly 63 LGERVVVEPARG-TARGSNRDRYDDRYGGRRGGGGG---RYNEKNKNSRSSSRYGP-PLRTEYRL 122
Fly 123 IVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIH 187
Fly 188 LVEDRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPV 252
Fly 253 KSRSRSRSRS-NKSRDVSKSKSKSHSRTRSRSPKRER---------------------------- 288
Fly 289 -------------------DSRSRSRSVSKRESRSRSRSKSIHRDSRSRDRSASAENKSRSRSRS 334
Fly 335 RSASPKNGNASPDRNNESM 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
B52 | NP_001014619.2 | RRM1_SRSF4_like | 5..74 | CDD:240783 | 23/75 (31%) |
RRM2_SRSF4_like | 120..191 | CDD:241044 | 1/70 (1%) | ||
Snrnp70 | NP_033250.3 | U1snRNP70_N | 3..93 | CDD:371969 | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 48..79 | ||||
Required for interaction with U1 RNA. /evidence=ECO:0000250|UniProtKB:P08621 | 92..202 | 31/96 (32%) | |||
RRM_snRNP70 | 102..187 | CDD:240682 | 26/81 (32%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 187..439 | 66/327 (20%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |