Protein Alignment B52 and rnp-1

DIOPT Version :9

• Sequence 1: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_001256408.1
• Gene: rnp-1 / 179672
• WormBaseID: WBGene00004384
• Length: 305
• Species: Caenorhabditis elegans
• Alignment Length: 74
• Identity: 20/74 - (27%)
• Similarity: 36/74 - (48%)
• Gaps: 1/74 - (1%)

  Fly     4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVV 68
            |:::||.||..|....|::.|:.:.:..:..|...|.||..|: .|.|..:..|.|..:.|:.|.
 Worm     3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEE-DDVDPIITRLTGYTIDGKVVN 66

  Fly    69 VEPARGTAR 77
            ::.:....|
 Worm    67 IKKSTSKLR 75

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	18/68 (26%)
		RRM2_SRSF4_like	120..191	CDD:241044
rnp-1	NP_001256408.1	RRM	<2..>83	CDD:223796	20/74 (27%)
		RRM1_2_CoAA_like	4..68	CDD:240789	18/64 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23147
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100