Protein Alignment B52 and rnp-7

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_498565.2
• Gene: rnp-7 / 176002
• WormBaseID: WBGene00004390
• Length: 332
• Species: Caenorhabditis elegans
• Alignment Length: 275
• Identity: 66/275 - (24%)
• Similarity: 96/275 - (34%)
• Gaps: 94/275 - (34%)

  Fly     6 VYVGGLPYGVRERDLERFFKGYGRTRDILI-------KNGYGFVEFEDYRDADDAVYELNGKELL 63
            ::||.:.|...|..|.|.|:.||:.:.:.:       ..||.|:|:.|..:...|..:.:|.::.
 Worm   106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVD 170

  Fly    64 GERVVVEPARGTARGSNRDRYDDRYGGRRG-------------------GGGGRYNEKNKNSRSS 109
            |:|:||:..||..:.:...|   |.||.:|                   |.||.|.:::: .||.
 Worm   171 GKRLVVDYERGRTQKTWLPR---RLGGGKGDTRKTREAKSVIEEREIASGFGGGYEDRDR-ERSG 231

  Fly   110 SRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIE 174
            ||                      ...:|..|..|    .:...:|.:.|
 Worm   232 SR----------------------DRRQDSYRNGG----GNDRDRRESSG--------------- 255

  Fly   175 KLDDTELNGRRIHLVEDRRGGRSG-GGGGSGRGRSRSSS-------SRSRSRSRRRSRSRRSSHS 231
                    |.|     |.|||..| ||||..|...||..       .|...|...|..||.|:..
 Worm   256 --------GFR-----DNRGGGGGFGGGGRDRFNDRSGGGGYGGDRDRGGDRGGDRGGSRYSTGG 307

  Fly   232 RSKS--RSRSKSRGG 244
            .|..  ||...|.||
 Worm   308 GSGGGYRSGGGSSGG 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	20/74 (27%)
		RRM2_SRSF4_like	120..191	CDD:410012	7/70 (10%)
rnp-7	NP_498565.2	U1snRNP70_N	4..95	CDD:432406
		RRM_snRNP70	103..192	CDD:409682	23/88 (26%)