Protein Alignment B52 and rsp-2

DIOPT Version :9

• Sequence 1: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_496441.1
• Gene: rsp-2 / 174747
• WormBaseID: WBGene00004699
• Length: 281
• Species: Caenorhabditis elegans
• Alignment Length: 349
• Identity: 139/349 - (39%)
• Similarity: 198/349 - (56%)
• Gaps: 77/349 - (22%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 69
            |||:|.||....:||:|.||:|||:..|:::|||:|||:|:|.|||||||::||||||.||||::
 Worm     3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVIL 67

  Fly    70 E-PARGTARGSNRDRYDDRYGGR----RGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSS 129
            | |.|..  |.|.:|....:.||    |.||..::         |:||..|..|.:||:::|||:
 Worm    68 EFPRRKV--GYNEERSGSGFRGREPTFRKGGERQF---------SNRYSRPCSTRFRLVIDNLST 121

  Fly   130 RVSWQDLKDYMRQAG-EVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRR 193
            |.||||:||::|:.| |.||::|||:..|:.:|.|.|..|::.|:.||...:||||::...::.|
 Worm   122 RYSWQDIKDHIRKLGIEPTYSEAHKRNVNQAIVCFTSHDDLRDAMNKLQGEDLNGRKLKCTDETR 186

  Fly   194 GGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRS 258
                               .||||||.||                      ||:|:||      :
 Worm   187 -------------------DRSRSRSPRR----------------------RSRSRSP------T 204

  Fly   259 RSRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRSKSIHRDSRSRDRSAS 323
            ||||..:|..|....:|..::||.|||:..|.|:||      ||:|||||      ...|.||.|
 Worm   205 RSRSPPARRRSPGSDRSDRKSRSASPKKRSDKRARS------ESKSRSRS------GGRRSRSNS 257

  Fly   324 AENKSRS-RSRSRSASPKNGNASP 346
            ..|:|.| :.|..::||::|:|||
 Worm   258 PPNRSPSPKKRRDNSSPRSGSASP 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	42/69 (61%)
		RRM2_SRSF4_like	120..191	CDD:241044	32/71 (45%)
rsp-2	NP_496441.1	RRM_SF	112..184	CDD:302621	32/71 (45%)
		RRM1_SRSF4_like	3..71	CDD:240783	41/67 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	91	1.000	Domainoid score	I4861
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S1097
OMA	1	1.010	-	-		QHG45999
OrthoDB	1	1.010	-	-		D1315388at2759
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	1	1.000	-	-		otm14269
orthoMCL	1	0.900	-	-		OOG6_101955
Panther	1	1.100	-	-	LDO	PTHR23147
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1390
SonicParanoid	1	1.000	-	-		X517
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	14	13.770