DRSC/TRiP Functional Genomics Resources

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Protein Alignment B52 and Srsf10

DIOPT Version :10

Sequence 1:NP_788671.2 Gene:B52 / 41670 FlyBaseID:FBgn0004587 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001073856.1 Gene:Srsf10 / 14105 MGIID:1333805 Length:262 Species:Mus musculus


Alignment Length:347 Identity:99/347 - (28%)
Similarity:154/347 - (44%) Gaps:110/347 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVYELNGKEL 62
            ::|..:....|..||.|.|..||...|:.:        ..|:.:|:|||.|||:||::.|:.|.:
Mouse    12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWI 76

  Fly    63 LGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENL 127
            .|.::.::.|:|..:..|:.:..:   ||......||::.::..||.||                
Mouse    77 CGRQIEIQFAQGDRKTPNQMKAK
E---GRNVYSSSRYDDYDRYRRSRSR---------------- 122

  Fly   128 SSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDR 192
                                   ::::||:                 :....:.|.||.:...:.
Mouse   123 -----------------------SYERRRS-----------------RSRSFDYNYRRSYSPRNS 147

  Fly   193 RGGRSGGGGGSGR-GRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRS 256
            |        .:|| .||||.|...|.:.|.||.||    |:|.||||||     |:.|..:|::|
Mouse   148 R--------PTGRPRRSRSHSDNDRFKHRNRSFSR----SKSNSRSRSK-----SQPKKEMKAKS 195

  Fly   257 RSRSRSN-KSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRSKSIHRDSRSRDR 320
            ||||.|: |:|..||:.||:|.::.||   .|::||.:....||.:|||:||             
Mouse   196 RSRSASHTKTRGTSKTDSKTHYKSGSR---YEKESRKKEPPRSKSQSRSQSR------------- 244

  Fly   321 SASAENKSRSRSRSRS-ASPKN 341
                   |||:||||| .|||:
Mouse   245 -------SRSKSRSRSWTSPKS 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B52NP_788671.2 RRM1_SRSF4_like 5..74 CDD:409774 23/75 (31%)
RRM2_SRSF4_like 120..191 CDD:410012 5/70 (7%)
Srsf10NP_001073856.1 RRM_SF 5..99 CDD:473069 25/86 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..262 70/240 (29%)

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