DRSC/TRiP Functional Genomics Resources

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Protein Alignment B52 and SRSF12

DIOPT Version :10

Sequence 1:NP_788671.2 Gene:B52 / 41670 FlyBaseID:FBgn0004587 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_542781.3 Gene:SRSF12 / 135295 HGNCID:21220 Length:261 Species:Homo sapiens


Alignment Length:354 Identity:97/354 - (27%)
Similarity:143/354 - (40%) Gaps:124/354 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVYELNGKEL 62
            :::..:....|..||.|.|..||...|:.|        ..|:.:|:|||.|||:||:|.||.|.:
Human    12 LFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWV 76

  Fly    63 LGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENL 127
            .|.::.::.|:|       ||...          |:...|.::..|.|                 
Human    77 CGRQIEIQFAQG-------DRKTP----------GQMKSKERHPCSPS----------------- 107

  Fly   128 SSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDR 192
                                                                           |.
Human   108 ---------------------------------------------------------------DH 109

  Fly   193 RGGRSGGGGGSGRGRSRSSS---SRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRS--KSKSPV 252
            |..||   ....|.||||||   :|.||.|.:.||.||.|:|:|||||:|..|...|  :|::|.
Human   110 RRSRS---PSQRRTRSRSSSWGRNRRRSDSLKESRHRRFSYSQSKSRSKSLPRRSTSARQSRTPR 171

  Fly   253 K---SRSRSRSRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSKR-ESRSRSRSKSIHR 313
            :   ||.||||:|.:.|      |||..:::|.||:::..|.::|||..:. :|.:||..||...
Human   172 RNFGSRGRSRSKSLQKR------SKSIGKSQSSSPQKQTSSGTKSRSHGRHSDSIARSPCKSPKG 230

  Fly   314 DSRSRDRSASAENKS-RSRSRSRSASPKN 341
            .:.|..:..:|::.. ||.|||||...||
Human   231 YTNSETKVQTAKHSHFRSHSRSRSYRHKN 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B52NP_788671.2 RRM1_SRSF4_like 5..74 CDD:409774 25/75 (33%)
RRM2_SRSF4_like 120..191 CDD:410012 0/70 (0%)
SRSF12NP_542781.3 RRM_SRSF10_SRSF12 10..93 CDD:240758 28/87 (32%)
PABP-1234 <12..211 CDD:130689 78/304 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..261 73/280 (26%)

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