DRSC/TRiP Functional Genomics Resources

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Protein Alignment B52 and x16

DIOPT Version :10

Sequence 1:NP_788671.2 Gene:B52 / 41670 FlyBaseID:FBgn0004587 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_061512248.1 Gene:x16 / 1277682 VectorBaseID:AGAMI1_014998 Length:231 Species:Anopheles gambiae


Alignment Length:317 Identity:110/317 - (34%)
Similarity:141/317 - (44%) Gaps:105/317 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGKELLGE 65
            ::||||.|.....::|:|..|..||..|::.:..   |:.||||||.|||:|||..|:|:.:.|.
Mosquito    11 AKVYVGELGNNASKQDIEEAFGYYGPLRNVWVARNPPGFAFVEFEDARDAEDAVRGLDGRTISGR 75

  Fly    66 RVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSR 130
            |..||.:.|.              |.||||||             |.|||               
Mosquito    76 RARVELSTGR--------------GGRGGGGG-------------RGGPP--------------- 98

  Fly   131 VSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDT--ELNGRRIHLVED-R 192
                                     |..|          |....:.||.  |..||. |...| .
Mosquito    99 -------------------------RGGG----------KGGRFQSDDRCYECGGRG-HFARDCA 127

  Fly   193 RGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSR 257
            |.||        |||.||.|.|||||..|       :.|||.|||||:||..||:||:..|..:.
Mosquito   128 RSGR--------RGRKRSRSPRSRSRELR-------TRSRSYSRSRSRSRDRRSRSKATPKRGAA 177

  Fly   258 SRSRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRSKSIHRD 314
            :.:|| .||||||:..::.||:.|||     .|||..||:|:.:|||.|||:|.||:
Mosquito   178 ANNRS-LSRDVSKTPRRNVSRSPSRS-----KSRSIRRSLSRSQSRSVSRSRSRHRN 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B52NP_788671.2 RRM1_SRSF4_like 5..74 CDD:409774 30/71 (42%)
RRM2_SRSF4_like 120..191 CDD:410012 9/72 (13%)
x16XP_061512248.1 None

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