DRSC/TRiP Functional Genomics Resources

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Protein Alignment B52 and LOC1271032

DIOPT Version :10

Sequence 1:NP_788671.2 Gene:B52 / 41670 FlyBaseID:FBgn0004587 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_309774.2 Gene:LOC1271032 / 1271032 VectorBaseID:AGAMI1_014965 Length:393 Species:Anopheles gambiae


Alignment Length:402 Identity:78/402 - (19%)
Similarity:123/402 - (30%) Gaps:136/402 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVYELNGKEL 62
            |:||.:||...|..|:..|...|....:.:        ..||||.|::|...|..|:..|||.| 
Mosquito    16 VFVGNIPYEATEEKLKDIFCEVGPVLSLKLVFDRESGKPKGYGFCEYKDQETALSAMRNLNGYE- 79

  Fly    63 LGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY------- 120
                                     :|||.........||::...::...||.:...|       
Mosquito    80 -------------------------FGGRALRVDNACTEKSRMEMAALLQGPQVENPYGAECDPE 119

  Fly   121 ---RLIVENLSSRVSWQDLKDYMRQA------------------GEVTYA-----------DAHK 153
               .||.:.::. :....:.:.||||                  .::|||           |:| 
Mosquito   120 ETPDLIAKTVTG-LQPDQMYELMRQAKACIQNDPLEARNMLLENPQLTYALLQSAVVMRIVDSH- 182

  Fly   154 QRRNEGVVEFASLSDMKTAIEKLDDTELNG-----RRIHLVEDRRGGRSGGGGGSGRGRSRSSSS 213
                   ...:.|....|....|.|..|:.     .:||...|   |..|||             
Mosquito   183 -------TALSFLHGRNTMPPVLTDDPLSAVPTVREQIHPAFD---GPDGGG------------- 224

  Fly   214 RSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRSRSR----------SNKSRDV 268
                      ...|..|..|..|...:.|..::.:..||......|..          :.....|
Mosquito   225 ----------HEPRQFHHDSDERHLLRDRMAQAAAAPPVPMDMDLRMMDPFMAGHQPGNILPEPV 279

  Fly   269 SKSKSKSHSRTRSRSPKRERDSRSRSRSV-------SKRESRSRSRSKSIHRDSRSRDRSASAEN 326
            :...:....|.|...|:..:|.|..:...       ||.:..:.|.:.:.|     ..::|:||.
Mosquito   280 AFPPAGVEIRPRPVDPRLHKDPRLEAAGAPSGPMGGSKAQMATASSALADH-----AAKAAAAEP 339

  Fly   327 KSRSRSRSRSAS 338
            ||:: ..|..||
Mosquito   340 KSKA-GASNDAS 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B52NP_788671.2 RRM1_SRSF4_like 5..74 CDD:409774 21/75 (28%)
RRM2_SRSF4_like 120..191 CDD:410012 19/114 (17%)
LOC1271032XP_309774.2 None

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