DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment B52 and hnrnpm

DIOPT Version :9

Sequence 1:	NP_001014619.2	Gene:	B52 / 41670	FlyBaseID:	FBgn0004587	Length:	355	Species:	Drosophila melanogaster
Sequence 2:	XP_004911113.1	Gene:	hnrnpm / 100489127	XenbaseID:	XB-GENE-993962	Length:	744	Species:	Xenopus tropicalis

Alignment Length:	140	Identity:	45/140 - (32%)
Similarity:	64/140 - (45%)	Gaps:	28/140 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    94 GGGGRYNEKNKN-----SRSSSRYGP--PLRTEYRLIVENLSSRVSWQDLKDYMRQ-AGEVTYA- 149
            |.|.:.|:.:|.     .::::|:.|  |.| .||..:.|:...|.||.|||.::: .|||||.
Frog    41 GDGDQVNQNDKRKEKGMKKTTNRFEPYNPQR-RYRAFISNIPFDVKWQALKDLVKEKVGEVTYVE 104

  Fly   150 ---DAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRGGRS-------------- 197
               |...:.|....|||.....||.|::.|:...||||.:.:.||..|.||
Frog   105 LLMDDEGKSRGCAAVEFKLEDSMKKAVQVLNKHVLNGRPLKVREDPDGERSRRAAHSVFGPGPMG 169

  Fly   198 -GGGGGSGRG 206
             ||.|..|.|
Frog   170 MGGPGPMGMG 179

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783
B52	NP_001014619.2	RRM2_SRSF4_like	120..191	CDD:241044	27/75 (36%)
hnrnpm	XP_004911113.1	HnRNP_M	48..72	CDD:371586	5/24 (21%)
		RRM1_hnRNPM	74..149	CDD:241101	26/74 (35%)
		PABP-1234	76..>388	CDD:130689	35/104 (34%)
		RRM2_hnRNPM_like	245..318	CDD:240832
		RRM3_hnRNPM	668..744	CDD:241105
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910