Protein Alignment Rbp4 and HRP1

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_014518.1
• Gene: HRP1 / 853997
• SGDID: S000005483
• Length: 534
• Species: Saccharomyces cerevisiae
• Alignment Length: 289
• Identity: 75/289 - (25%)
• Similarity: 127/289 - (43%)
• Gaps: 84/289 - (29%)

  Fly    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTI 97
            |:|||||:..||.:.||.:|.::|.|.|..:::||.:..||||||:::..|.||:.|.:.: |.:
Yeast   160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQ-HIL 223

  Fly    98 DNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGL------KEYHDENIVREYF 156
            |.|:::.|.|:||.:..:.|                   :||:||:      ||:      .|:|
Yeast   224 DGKVIDPKRAIPRDEQDKTG-------------------KIFVGGIGPDVRPKEF------EEFF 263

  Fly   157 SQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRS-----TQKA- 215
            ||:|.:...:|::|::||:.|.|||:.:....:.::....:........:|:||:     .||:
Yeast   264 SQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPRHMQQKSS 328

  Fly   216 -----------DRR---------FRFPIFSSVRAGYIP---PQPATADSYNYNNPNYNPYLAQS- 256
                       :||         |.....:.:..||.|   || |..|.|......|.....|:
Yeast   329 NNGGNNGGNNMNRRGGNFGNQGDFNQMYQNPMMGGYNPMMNPQ-AMTDYYQKMQEYYQQMQKQTG 392

  Fly   257 ---------------------VLPPSAFT 264
                                 .:||:|.|
Yeast   393 MDYTQMYQQQMQQMAMMMPGFAMPPNAMT 421

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	31/76 (41%)
		RRM2_hnRNPA_like	137..209	CDD:240774	20/77 (26%)
HRP1	NP_014518.1	PABP-1234	<144..463	CDD:130689	75/289 (26%)
		RRM1_Hrp1p	161..236	CDD:409991	30/75 (40%)
		RRM2_Hrp1p	244..321	CDD:409767	22/82 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	2	1.870