Protein Alignment Rbp4 and PAB8

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001185184.1
• Gene: PAB8 / 841399
• AraportID: AT1G49760
• Length: 671
• Species: Arabidopsis thaliana
• Alignment Length: 275
• Identity: 67/275 - (24%)
• Similarity: 113/275 - (41%)
• Gaps: 29/275 - (10%)

  Fly    34 IFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVD-PKSVEIVQRARPHTI 97
            :::..||...:.|.|...|.:||:....|::||. ...|:|||||.:.: ..:...|......|.
plant   226 VYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDG-EGKSKGFGFVNFENSDDAARAVDALNGKTF 289

  Fly    98 DN---------KIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVR 153
            |:         |..|.:..| :|.|::         |....|.......:::..|.|...::.:|
plant   290 DDKEWFVGKAQKKSERETEL-KQKFEQ---------SLKEAADKSQGSNLYVKNLDESVTDDKLR 344

  Fly   154 EYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTL-VEVKRSTQKADR 217
            |:|:.||.:.|.|::.| .:|..|..||:.|..|..|.:|:......::.|. :.|..:.:|.||
plant   345 EHFAPFGTITSCKVMRD-PSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDR 408

  Fly   218 RFRFPI-FSSVRAGYIPPQPA-TADSYNYNNPNYNPYLAQSVLPPSAFTN---GWAHYVIP-MAP 276
            :.|... ||.:|...:||... ....|....|.....|.....||:....   |:...::| |.|
plant   409 KARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMIPQPGFGYQQQLVPGMRP 473

  Fly   277 KPTPGQNMAASLPSQ 291
            ..:|..|....:..|
plant   474 GGSPMPNFFMPMMQQ 488

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	22/85 (26%)
		RRM2_hnRNPA_like	137..209	CDD:240774	19/72 (26%)
PAB8	NP_001185184.1	PABP-1234	46..646	CDD:130689	67/275 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910