Sequence 1: | NP_476935.1 | Gene: | Rbp4 / 41668 | FlyBaseID: | FBgn0010258 | Length: | 428 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_200181.2 | Gene: | AT5G53700 / 835451 | AraportID: | AT5G53700 | Length: | 251 | Species: | Arabidopsis thaliana |
Alignment Length: | 291 | Identity: | 62/291 - (21%) |
---|---|---|---|
Similarity: | 90/291 - (30%) | Gaps: | 103/291 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 163 ASVKLLMDRETGRQRAFG--FLEFVDPSSAE--KALAPRKHW-----ILQTLVEVKRSTQKADRR 218
Fly 219 FRFPIFSSVRA--GYIPPQPATADSYNYNNPNYNPYLAQSVLPPSAFTNGWAHYVIPMAPKPTPG 281
Fly 282 QNMAASLPSQQL-----------AEHSLNGHGPDMWSSYPKTGIY--------SAQEWTSSKVAE 327
Fly 328 WGPKAGHKHAQTSTNDRAKIDLKELQAATFNNKLDFGARGDADRMSGAGLGLGLTGGAAVGVGAI 392
Fly 393 KKWPTQDYKVFKPA---KSPTNGVIPKIGKE 420 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp4 | NP_476935.1 | RRM_SF | 33..110 | CDD:302621 | |
RRM2_hnRNPA_like | 137..209 | CDD:240774 | 13/54 (24%) | ||
AT5G53700 | NP_200181.2 | RRM_SF | 22..100 | CDD:302621 | 22/114 (19%) |
RRM_SF | 123..200 | CDD:302621 | 20/109 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |