Protein Alignment Rbp4 and AT4G36960

DIOPT Version :10

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_568011.1
• Gene: AT4G36960 / 829850
• AraportID: AT4G36960
• Length: 379
• Species: Arabidopsis thaliana
• Alignment Length: 236
• Identity: 56/236 - (23%)
• Similarity: 99/236 - (41%)
• Gaps: 45/236 - (19%)

  Fly    32 RKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHT 96
            ||:.:.|:......:.|:.:.|:||.:.|.:|::|..:..|||||:||:...:..:...:.. |.
plant     3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALKGE-HF 66

  Fly    97 IDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFGP 161
            :.|:|:|.|.|.|:::.::..               ....|||:..:.....|:..|.:|.::|.
plant    67 LGNRILEVKVATPKEEMRQPA---------------KKVTRIFVARIPSSVSESDFRSHFERYGE 116

  Fly   162 VASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRSTQKADRRFRFPIFSS 226
            :..:.:..|..:.:.|..||:.|....|.|. |....|.:..|.|.|.|:|.|.|..
plant   117 ITDLYMPKDYNSKQHRGIGFITFSSADSVED-LMEDTHDLGGTTVAVDRATPKEDDH-------- 172

  Fly   227 VRAGYIPPQPATADSYNYNNPNYNPYLAQSVLPPSAFTNGW 267
                  ||:|              |.:|:...||.|...|:
plant   173 ------PPRP--------------PPVARMSRPPVAIAGGF 193

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	34..105	CDD:473069	19/70 (27%)
		RRM2_hnRNPA_like	137..209	CDD:409766	18/71 (25%)
AT4G36960	NP_568011.1	RRM_SF	4..77	CDD:473069	21/73 (29%)
		PABP-1234	5..>378	CDD:130689	54/234 (23%)
		RRM_SF	91..166	CDD:473069	20/75 (27%)