DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rbp4 and ATRBP45C

DIOPT Version :9

Sequence 1:	NP_476935.1	Gene:	Rbp4 / 41668	FlyBaseID:	FBgn0010258	Length:	428	Species:	Drosophila melanogaster
Sequence 2:	NP_567764.1	Gene:	ATRBP45C / 828808	AraportID:	AT4G27000	Length:	415	Species:	Arabidopsis thaliana

Alignment Length:	263	Identity:	59/263 - (22%)
Similarity:	107/263 - (40%)	Gaps:	54/263 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 EGYEHLRKIFIGGLSTQTT----VETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVD-PKS 85
            ||.||  .:|:|.|:...|    .||.:..:|.   |..|.|:.|..:..|:|:|||.:.| .:.
plant   169 EGPEH--TVFVGDLAPDVTDHMLTETFKAVYSS---VKGAKVVNDRTTGRSKGYGFVRFADESEQ 228

  Fly    86 VEIVQRARPHTIDNKIVETKHALPRQDF-KRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDE 149
            :..:.........::.:.|..|..::.. .:.....:..|:.| |:...|: .||:|.:.:...|
plant   229 IRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSG-ESDPTNT-TIFVGAVDQSVTE 291

  Fly   150 NIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRSTQK 214
            :.::..|.|||.:..||:    ..|::  .||:::.:.:.||:||:            |...||.
plant   292 DDLKSVFGQFGELVHVKI----PAGKR--CGFVQYANRACAEQALS------------VLNGTQL 338

  Fly   215 ADRRFRF-----PIFSSVR---------AGYIPPQPATADSYNYNNPNYNPYLAQSVLPPSAFTN 265
            ..:..|.     |.....:         .||....|...::|.|..|..:         |:|:..
plant   339 GGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYAPPPQD---------PNAYYG 394

  Fly   266 GWA 268
            |:|
plant   395 GYA 397

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	19/81 (23%)
Rbp4	NP_476935.1	RRM2_hnRNPA_like	137..209	CDD:240774	17/71 (24%)
ATRBP45C	NP_567764.1	RRM1_SECp43_like	81..158	CDD:240790
		ELAV_HUD_SF	91..346	CDD:273741	48/201 (24%)
		RRM2_SECp43_like	172..251	CDD:240791	20/83 (24%)
		RRM3_NGR1_NAM8_like	277..348	CDD:240792	22/89 (25%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910