Protein Alignment Rbp4 and RBP-DR1

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_567249.1
• Gene: RBP-DR1 / 828090
• AraportID: AT4G03110
• Length: 441
• Species: Arabidopsis thaliana
• Alignment Length: 488
• Identity: 96/488 - (19%)
• Similarity: 167/488 - (34%)
• Gaps: 155/488 - (31%)

  Fly    24 KEEGYEHLR-----KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDP 83
            |||..|...     |:|:|.:....:...|...|.:|.:|.:..:::|.::..|||..|:.....
plant     5 KEENREKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSR 69

  Fly    84 KSVEIVQRA--RPHTID--NKIVETKHA---LPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLG 141
            :..:.:..|  ...|:.  |.:::.|:|   |.|.:.|                       :|:|
plant    70 EEADKLVNACHNKKTLPGANSLLQVKYADGELERLEHK-----------------------LFVG 111

  Fly   142 GLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAP--RKHWILQT 204
            .|.:...|..|:..||::|.:..:::|...:. ..:...||::.....|..|:..  .||.:..:
plant   112 MLPKNVSEAEVQSLFSKYGTIKDLQILRGAQQ-TSKGCAFLKYETKEQAVSAMESINGKHKMEGS 175

  Fly   205 LV---------EVKRST---QKADRRF---------RFPIFSSVRAGYIPPQPATADSYNYNNPN 248
            .|         |.:|.|   |||....         ...:|.::..||:||.    :.|.|:.|
plant   176 TVPLVVKWADTERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPY----NGYGYHQP- 235

  Fly   249 YNPYLAQSVLPP----SAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGPD----- 304
              |.....:|||    :||:|        |..:|..|.|            ::|.|..||
plant   236 --PGTYGYMLPPIQNQAAFSN--------MIAQPNQGNN------------NALQGTSPDSVPPR 278

  Fly   305 -------------MWSSYP-----------KTGIYSAQEWTSSK------------------VAE 327
                         |.|.||           ..||.|.:..:||.                  |..
plant   279 LARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVSPRPLSSSPGSISPGMSTPLGIGLSSVVQT 343

  Fly   328 WGPKAGHKHAQTSTNDRAKIDLKELQAATFNNKLDFGARGDADRMSGAGLGLG------------ 380
            .||:..:....   |...:...:||.||..:..:...|:...|:.:|.....|
plant   344 EGPEGANLFIY---NIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQN 405

  Fly   381 ---LTGGAAVGVGAIKKWPTQDYKVFKPAKSPT 410
               :..|..:|...:|....:|....:|:.:|:
plant   406 AIDMMNGRHLGGKKLKVQLKRDSNNGQPSSNPS 438

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	18/83 (22%)
		RRM2_hnRNPA_like	137..209	CDD:240774	17/82 (21%)
RBP-DR1	NP_567249.1	RRM1_2_CELF1-6_like	19..95	CDD:409796	15/75 (20%)
		RRM1_2_CELF1-6_like	107..182	CDD:409796	17/98 (17%)
		U2AF_lg	<231..>423	CDD:273727	41/217 (19%)
		RRM3_CELF1-6	351..423	CDD:409797	12/74 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910