Protein Alignment Rbp4 and UBA2A

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001190109.1
• Gene: UBA2A / 824853
• AraportID: AT3G56860
• Length: 478
• Species: Arabidopsis thaliana
• Alignment Length: 392
• Identity: 95/392 - (24%)
• Similarity: 142/392 - (36%)
• Gaps: 108/392 - (27%)

  Fly    23 IKEEGYEHL----------------RKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNH 71
            :||...:|:                ||||:.||...|..|||...|.|:|.:.|...:.|.:|..
plant   115 LKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGK 179

  Fly    72 SRGFGFVTYVDPKSVEIVQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNS- 135
            |:|:||:.|..........:.....|.:::...:.|.....|   ||......:....|...||
plant   180 SKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVF---GGAPIAAAAVSAPAQHSNSE 241

  Fly   136 ---KRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPR 197
               |:|::..:....|...:..:||:||.:....|.:|:.|||.:  ||..||..|| |.|
plant   242 HTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPK--GFCLFVYKSS-ESA---- 299

  Fly   198 KHWILQTLVEVKRSTQKADRRFRFPIFSSVRA--GYIPPQPATADSYN-----YNNPNY------ 249
                       ||:.::..:.|...|....:|  |   |:|.....::     ||||.|
plant   300 -----------KRALEEPHKTFEGHILHCQKAIDG---PKPGKQQQHHHNPHAYNNPRYQRNDNN 350

  Fly   250 --------------NPY-----LAQSVLPP--SAFTNGWAHYVIPMAPKPTPGQNMAASL----- 288
                          ||.     .||.:.|.  .|.|...|.....:|..|..||.:..||
plant   351 GYGPPGGHGHLMAGNPAGMGGPTAQVINPAIGQALTALLASQGAGLAFNPAIGQALLGSLGTAAG 415

  Fly   289 -------------PSQQLAEHSLNGHG--PDMWSSY--PKTGIYSAQEWTS---SKVAEWG-PKA 332
                         .:|.:|..::.|:|  |.:...|  |:.|    |..||   ..|..:| |..
plant   416 VNPGNGVGMPTGYGTQAMAPGTMPGYGTQPGLQGGYQTPQPG----QGGTSRGQHGVGPYGTPYM 476

  Fly   333 GH 334
            ||
plant   477 GH 478

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	22/76 (29%)
		RRM2_hnRNPA_like	137..209	CDD:240774	19/71 (27%)
UBA2A	NP_001190109.1	PABP-1234	136..>347	CDD:130689	62/234 (26%)
		RRM_SF	140..215	CDD:418427	22/74 (30%)
		Med15	361..>465	CDD:312941	25/107 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920