Protein Alignment Rbp4 and CP29

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001190079.1
• Gene: CP29 / 824514
• AraportID: AT3G53460
• Length: 363
• Species: Arabidopsis thaliana
• Alignment Length: 253
• Identity: 56/253 - (22%)
• Similarity: 87/253 - (34%)
• Gaps: 75/253 - (29%)

  Fly    17 GDGKTAIKEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYV 81
            ||....::...:....|:|:|.||.......|...|...|.|....|:.|.|:..||||||||..
plant    84 GDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMS 148

  Fly    82 DPKSVEIVQR-----------------------------ARPHTID-----NKIVETKHALPRQ- 111
            ....||...:                             .||..::     .|..|:....||.
plant   149 TAAEVEAAAQQFNGYVSRYLCSLLCLYLLIRVLCGLEFEGRPLRVNAGPPPPKREESFSRGPRSG 213

  Fly   112 ----------DFKRGGGVGSV-VGSFGCE-----------------------------AGFMNSK 136
                      ..:||||.||. .|.:|.|                             :|..:..
plant   214 GYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSGSGSGSGSGN 278

  Fly   137 RIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKAL 194
            |:::|.|....|:..:...|::.|.|...:::.||::||.:.|||:........:||:
plant   279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAI 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	26/110 (24%)
		RRM2_hnRNPA_like	137..209	CDD:240774	16/58 (28%)
CP29	NP_001190079.1	RRM_SF	100..194	CDD:302621	24/93 (26%)
		RRM_HP0827_like	279..355	CDD:240845	16/58 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010