Protein Alignment Rbp4 and AT2G41060

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001078035.1
• Gene: AT2G41060 / 818705
• AraportID: AT2G41060
• Length: 451
• Species: Arabidopsis thaliana
• Alignment Length: 287
• Identity: 66/287 - (22%)
• Similarity: 110/287 - (38%)
• Gaps: 56/287 - (19%)

  Fly    23 IKEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVE 87
            :.:|...| ||||:.||...|..::|...|.|:|.:.|...:.|.||..|:|:||:.:.....
plant   120 VADEDLVH-RKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSG-- 181

  Fly    88 IVQRARPHTIDNKIVETKHALPRQDFKRG--------GGVGSVVGS-FGCEAGFMN----SKRIF 139
                            .::||.:...|.|        ..:|.|.|: ....|...|    .::|:
plant   182 ----------------ARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKIY 230

  Fly   140 LGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQT 204
            :..:....|...:.|:||:||.:....|.:|:.|||.:.|....:....||:|||
plant   231 VSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKAL---------- 285

  Fly   205 LVEVKRSTQKADRRFRFPIFSSVRAGYIPPQPATADSYNYNNPNYNPYLAQSVLPPSAFTNGWAH 269
                    ::..:.|...:....:|...|.| .....:|:|:.|.|....::.........|..|
plant   286 --------EEPHKTFEGHVLHCHKANDGPKQ-VKQHQHNHNSHNQNSRYQRNDNNGYGAPGGHGH 341

  Fly   270 YV-----IPMAPKPTPGQNMAASLPSQ 291
            ::     ...|..|..||.:.|.|.||
plant   342 FIAGNNQAVQAFNPAIGQALTALLASQ 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	20/76 (26%)
		RRM2_hnRNPA_like	137..209	CDD:240774	18/71 (25%)
AT2G41060	NP_001078035.1	RRM_SF	128..203	CDD:302621	23/92 (25%)
		RRM_RBM24_RBM38_like	227..302	CDD:240830	19/92 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920