Protein Alignment Rbp4 and PAB7

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_181204.1
• Gene: PAB7 / 818238
• AraportID: AT2G36660
• Length: 609
• Species: Arabidopsis thaliana
• Alignment Length: 342
• Identity: 71/342 - (20%)
• Similarity: 125/342 - (36%)
• Gaps: 84/342 - (24%)

  Fly    25 EEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIV 89
            ||.|.:|   ::..|....:.:.||..|::||.:....:.:|. :...||:.||.:.:|:..
plant   197 EEKYTNL---YMKNLDADVSEDLLREKFAEFGKIVSLAIAKDE-NRLCRGYAFVNFDNPEDA--- 254

  Fly    90 QRARPHTID--------------NKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFL 140
             |....|::              .|..|.:..| |:.||.......::...         ..|::
plant   255 -RRAAETVNGTKFGSKCLYVGRAQKKAEREQLL-REQFKEKHEEQKMIAKV---------SNIYV 308

  Fly   141 GGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTL 205
            ..:.....|..:|::|||.|.:.|.||:.| |.|:.:.|||:.|   |:.|:|:...|.:..|..
plant   309 KNVNVAVTEEELRKHFSQCGTITSTKLMCD-EKGKSKGFGFVCF---STPEEAIDAVKTFHGQMF 369

  Fly   206 ----VEVKRSTQKADRRFRFPIFSSVRAGYIPPQPATADSYNYNNPNYNPYLAQSVLPPSAFTNG 266
                :.|..:.:|.||:.:.    .|:.|.......::.|.:.|...|.|..         :||.
plant   370 HGKPLYVAIAQKKEDRKMQL----QVQFGNRVEARKSSSSASVNPGTYAPLY---------YTNT 421

  Fly   267 WAHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGPDMWSSYPKTGIYSAQEWTSSKVAEWGPK 331
            ....|....|......||                    :.||||           :|:...:.|.
plant   422 HPGMVYQSYPLMWKSANM--------------------IGSSYP-----------NSEAVTYPPM 455

  Fly   332 AGHKHAQTSTNDRAKID 348
            ..:..::...|...|:|
plant   456 VANAPSKNRQNRIGKLD 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	17/90 (19%)
		RRM2_hnRNPA_like	137..209	CDD:240774	22/75 (29%)
PAB7	NP_181204.1	PABP-1234	24..582	CDD:130689	71/342 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910