Protein Alignment Rbp4 and AT2G35410

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_181084.1
• Gene: AT2G35410 / 818107
• AraportID: AT2G35410
• Length: 308
• Species: Arabidopsis thaliana
• Alignment Length: 189
• Identity: 42/189 - (22%)
• Similarity: 76/189 - (40%)
• Gaps: 15/189 - (7%)

  Fly    14 DCKGDGKTAIKEEGYEH-----LRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSR 73
            :...|.:|:.:|:..|.     .||:|:..|....:|..:...|.|.|.|.:..::|.. ...:|
plant    72 ETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQK-DGKNR 135

  Fly    74 GFGFVTYVDPKSVE-IVQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKR 137
            ||.|||....:..: .:.:.....:..:|:....|   :.||:  ............|......:
plant   136 GFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFA---RRFKK--PTPKSPNDLPSPAPGDTRHK 195

  Fly   138 IFLGGLKEYHDENIVREYF--SQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKAL 194
            :::..|........:||.|  :.|.||::..:..|.| ||...:||:.|.....||.|:
plant   196 LYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPE-GRSSGYGFVSFATREEAENAI 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	17/77 (22%)
		RRM2_hnRNPA_like	137..209	CDD:240774	17/60 (28%)
AT2G35410	NP_181084.1	PABP-1234	97..>279	CDD:130689	36/164 (22%)
		RRM_SF	97..168	CDD:409669	15/71 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010