Protein Alignment Rbp4 and PABPC1L

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001359108.1
• Gene: PABPC1L / 80336
• HGNCID: 15797
• Length: 619
• Species: Homo sapiens
• Alignment Length: 311
• Identity: 78/311 - (25%)
• Similarity: 121/311 - (38%)
• Gaps: 78/311 - (25%)

  Fly    34 IFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTID 98
            |::..|......:.|:..|||||.:....|:||. |.|||.||||.:   :..|..|:|..|...
Human   193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNF---EKHEEAQKAVVHMNG 253

  Fly    99 NKI-------------VETKHALPR------QD-FKRGGGVGSVVGSFGCEAGFMNSKRIFLGGL 143
            .::             ||.::.|.|      || .:|..||                 .:::..|
Human   254 KEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGV-----------------NLYVKNL 301

  Fly   144 KEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEK---------------- 192
            .:..|::.:|:.||.:|.:.|.|::  .|.|..:.|||:.|..|..|.|
Human   302 DDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 364

  Fly   193 -ALAPRKH---WILQTLVEVKRSTQKADRRFRFPIFSSVR---AGYIP--PQPATADSYNYNNPN 248
             |||.||.   .||......:.||.   |....|:..|.:   :.::|  |||....:| |....
Human   365 VALAQRKEERKAILTNQYMQRLSTM---RTLSNPLLGSFQQPSSYFLPAMPQPPAQAAY-YGCGP 425

  Fly   249 YNP------YLAQSVLPPSAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQL 293
            ..|      :.:|...|.||:..|.:....|:.|:..|....:....|.|:
Human   426 VTPTQPAPRWTSQPPRPSSAYPPGASMVRPPVVPRRPPAHISSVRQASTQV 476

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	26/88 (30%)
		RRM2_hnRNPA_like	137..209	CDD:240774	24/91 (26%)
PABPC1L	NP_001359108.1	PABP-1234	11..606	CDD:130689	78/311 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910