Protein Alignment Rbp4 and Msi2

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: XP_006534494.1
• Gene: Msi2 / 76626
• MGIID: 1923876
• Length: 378
• Species: Mus musculus
• Alignment Length: 355
• Identity: 106/355 - (29%)
• Similarity: 157/355 - (44%)
• Gaps: 67/355 - (18%)

  Fly    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTI 97
            |:||||||.||:.::||.:||:||.:.:.:|:|||.:..||||||||:.||.||:.|.....|.:
Mouse    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHEL 86

  Fly    98 DNKIVETKHALPR----QDFKRGGG---VGSVVGSFGCEAGFM--NSKRIFLGGLKEYHDENIVR 153
            |:|.::.|.|.||    :..::||.   ..:.|.:.......|  .:|:||:|||........|:
Mouse    87 DSKTIDPKVAFPRRAQPKSQEQGGSWKRTWTTVQARAASGDQMVTRTKKIFVGGLSANTVVEDVK 151

  Fly   154 EYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRSTQKADRR 218
            :||.|||.|....|:.|:.|.|.|.|||:.|.:....||......|.|...:||.|::..|   .
Mouse   152 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK---E 213

  Fly   219 FRFPIFSSVRAGYIP---------------PQ---------PATADSYNYNNPNYNPYLAQSVLP 259
            ..||..:..||..:|               |.         |..|.||.|..|...|||..| .|
Mouse   214 VMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPALLPYLNAS-FP 277

  Fly   260 PSAF---------------TNGWA---HYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGP--D 304
            .:|:               .|.::   ::..|.:|        |.|.|::.......|..||  |
Mouse   278 AAAYGPVAAAAVAAARGSVLNSYSAQPNFGAPASP--------AGSNPARPGGFPGANSPGPVAD 334

  Fly   305 MWSSYPKTGIYSAQEWTSSKVAEWGPKAGH 334
            ::.  |.:.......:.|:...:.|...||
Mouse   335 LYG--PASQDSGVGNYISAASPQPGSGFGH 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	37/76 (49%)
		RRM2_hnRNPA_like	137..209	CDD:240774	27/71 (38%)
Msi2	XP_006534494.1	RRM1_MSI	23..97	CDD:241020	35/73 (48%)
		PABP-1234	<35..363	CDD:130689	97/342 (28%)
		RRM2_MSI	135..208	CDD:240769	27/72 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910