Sequence 1: | NP_476935.1 | Gene: | Rbp4 / 41668 | FlyBaseID: | FBgn0010258 | Length: | 428 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012814656.1 | Gene: | hnrnpab / 734098 | XenbaseID: | XB-GENE-6042555 | Length: | 326 | Species: | Xenopus tropicalis |
Alignment Length: | 316 | Identity: | 84/316 - (26%) |
---|---|---|---|
Similarity: | 139/316 - (43%) | Gaps: | 78/316 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTI 97
Fly 98 DNKIVETKHALP-RQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFGP 161
Fly 162 VASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRSTQKA--DRRF--RFP 222
Fly 223 IFSSVRAGYIPPQPATADSYNYNNPNYNPYLAQSVLPPSAFTN-GWAHYVIPMAPKPTPGQNMAA 286
Fly 287 SLPSQQLAEHSLNGHGPDMWSSYPKTGIYSAQEWTSSKVAEWGPKAGHKHAQTSTN 342 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp4 | NP_476935.1 | RRM_SF | 33..110 | CDD:302621 | 30/77 (39%) |
RRM2_hnRNPA_like | 137..209 | CDD:240774 | 24/71 (34%) | ||
hnrnpab | XP_012814656.1 | CBFNT | 1..52 | CDD:311868 | |
RRM1_hnRNPAB | 66..140 | CDD:241201 | 29/73 (40%) | ||
RRM2_hnRNPAB | 145..224 | CDD:241028 | 27/99 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |