DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp4 and Dazap1

DIOPT Version :10

Sequence 1:NP_476935.1 Gene:Rbp4 / 41668 FlyBaseID:FBgn0010258 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001365924.1 Gene:Dazap1 / 70248 MGIID:1917498 Length:407 Species:Mus musculus


Alignment Length:290 Identity:95/290 - (32%)
Similarity:137/290 - (47%) Gaps:59/290 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQR 91
            |.:.:.|:|:|||...||.||||.:|||:|.|.|.|:::|..:|.|||||||.:.||..|..|..
Mouse     5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

  Fly    92 ARPHTIDNKIVETKHALPR----------QDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEY 146
            :||||:|.:.::.|...||          :.:::|....|           ..|.:||:||:...
Mouse    70 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDS-----------SKSNKIFVGGIPHN 123

  Fly   147 HDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRS 211
            ..|..:||||.:||.|..|.::.|.|..|.|.|||:.|.|..|.::|:....|.|:...|||||:
Mouse   124 CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA 188

  Fly   212 TQKADRRFRFPIFSSVRAGYIPPQPATADSYNYNNPNYNPYLAQSVLPPSAFTNGWAHYVIPMAP 276
            ..:..:            ...|.||. |..:.            |.:.||| .||||.     .|
Mouse   189 EPRDSK------------NQAPGQPG-ASQWG------------SRVAPSA-ANGWAG-----QP 222

  Fly   277 KPTPGQNMAAS---LPSQQLAEHSLNGHGP 303
            .||..|.....   :|:.|    ::.|:||
Mouse   223 PPTWQQGYGPQGMWVPAGQ----AIGGYGP 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp4NP_476935.1 RRM_SF 34..105 CDD:473069 35/70 (50%)
RRM2_hnRNPA_like 137..209 CDD:409766 28/71 (39%)
Dazap1NP_001365924.1 RRM1_DAZAP1 11..92 CDD:409988 39/80 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..117 9/53 (17%)
RRM2_DAZAP1 111..190 CDD:409765 32/78 (41%)

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