Protein Alignment Rbp4 and dazl

DIOPT Version :10

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_571599.1
• Gene: dazl / 58039
• ZFINID: ZDB-GENE-000405-6
• Length: 229
• Species: Danio rerio
• Alignment Length: 248
• Identity: 56/248 - (22%)
• Similarity: 88/248 - (35%)
• Gaps: 81/248 - (32%)

  Fly    42 QTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTIDNKIVETKH 106
            |..|..:.|.:||            .:..|.:||       |.|:::              ...:
Zfish     6 QLPVCLICGLYSQ------------DIQKHRQGF-------PSSLKL--------------SNGY 37

  Fly   107 ALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDR 171
            .||.                    |.|....:|:||:....|||.:||:|:::|.|..||::..|
Zfish    38 ILPE--------------------GKMTPNTLFVGGIDMKVDENEIREFFAKYGSVKEVKIITYR 82

  Fly   172 ETGRQRAFGFLEF---VDPSSAEKALAPRKHWILQTLVEVKRSTQKADRRFRFPIFSSVRAGYIP 233
             .|..:.:||:.|   ||               :||:|:...|. |..:....|.....|:....
Zfish    83 -GGICKGYGFVYFSEDVD---------------IQTIVDQPISF-KGKKLKLGPAIMKERSSRSV 130

  Fly   234 PQPATADSYNYNNPNYNPYLAQS-----VLPPSAFTNGWAHYVIPMAPKPTPG 281
            ..|....| .:.||  .||:..|     :.|||...:|...|:.|.:....||
Zfish   131 SSPMIGPS-QWVNP--TPYMYCSCCPPGLAPPSPVFSGGNQYMQPYSYSSPPG 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	34..105	CDD:473069	10/62 (16%)
		RRM2_hnRNPA_like	137..209	CDD:409766	23/74 (31%)
dazl	NP_571599.1	RRM_DAZL	42..123	CDD:410073	28/97 (29%)
		PABP-1234	<47..203	CDD:130689	42/154 (27%)