DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rbp4 and Rbm38

DIOPT Version :9

Sequence 1:	NP_476935.1	Gene:	Rbp4 / 41668	FlyBaseID:	FBgn0010258	Length:	428	Species:	Drosophila melanogaster
Sequence 2:	NP_062420.2	Gene:	Rbm38 / 56190	MGIID:	1889294	Length:	237	Species:	Mus musculus

Alignment Length:	263	Identity:	66/263 - (25%)
Similarity:	98/263 - (37%)	Gaps:	81/263 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTI 97
            |||:|||...||..:||.:|..||.:.:|||:.|..:..|||:||||..|..:.:     |....
Mouse    33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAD-----RACKD 92

  Fly    98 DNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFGPV 162
            .|.|::.:.|                          |....:||          .:....|.|..
Mouse    93 PNPIIDGRKA--------------------------NVNLAYLG----------AKPRSLQTGFA 121

  Fly   163 ASVKLLMDRETGRQRAFGFL-EFVDPSSAEKALAPRKHWILQTLVEVKRSTQKADRRFRFPIFSS 226
            ..|:.|  ..|..||.:|.. .::.|.:           |:|..|.:..:.        .|..||
Mouse   122 VGVQQL--HPTLIQRTYGLTPHYIYPPA-----------IVQPSVVIPATP--------VPSLSS 165

  Fly   227 VRAGYIPPQPATADSYNYNNPNYN--PYLAQSVLPPSAFTN--GWAHYVIPMAPKPTPGQNMAAS 287
            ....|.|..||.|   .|....|:  ||.|.    |:|.|:  |:.:      |...| |.::|:
Mouse   166 PYLEYTPASPAYA---QYPPATYDQYPYAAS----PAAATSFVGYGY------PAAVP-QALSAA 216

  Fly   288 LPS 290
            .|:
Mouse   217 APA 219

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	29/76 (38%)
Rbp4	NP_476935.1	RRM2_hnRNPA_like	137..209	CDD:240774	14/72 (19%)
Rbm38	NP_062420.2	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..24
Rbm38	NP_062420.2	RRM_RBM24_RBM38_like	32..107	CDD:240830	30/104 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910