DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rbp4 and hnrnpa2b1

DIOPT Version :9

Sequence 1:	NP_476935.1	Gene:	Rbp4 / 41668	FlyBaseID:	FBgn0010258	Length:	428	Species:	Drosophila melanogaster
Sequence 2:	NP_001192271.1	Gene:	hnrnpa2b1 / 549680	XenbaseID:	XB-GENE-490993	Length:	350	Species:	Xenopus tropicalis

Alignment Length:	192	Identity:	73/192 - (38%)
Similarity:	118/192 - (61%)	Gaps:	13/192 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 EEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIV 89
            |...|..||:||||||.:||.::||.::.|:|.:.|.||:|||.|..||||||||:.....|:..
Frog     2 EREKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDAS 66

  Fly    90 QRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVRE 154
            ..|||||||.::||.|.|:.|::..:.|...:|             |::|:||:||..:|:.:||
Frog    67 MAARPHTIDGRVVEPKRAVAREESAKPGAHVTV-------------KKLFVGGIKEDTEEHHLRE 118

  Fly   155 YFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRSTQKAD 216
            ||.::|.:.|::::.|:::|::|.|||:.|.|....:|.:..:.|.|.....||:::..|.:
Frog   119 YFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQE 180

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	40/76 (53%)
Rbp4	NP_476935.1	RRM2_hnRNPA_like	137..209	CDD:240774	24/71 (34%)
hnrnpa2b1	NP_001192271.1	RRM1_hnRNPA2B1	7..87	CDD:241206	41/79 (52%)
		RRM2_hnRNPA2B1	100..179	CDD:241025	26/78 (33%)
		HnRNPA1	294..319	CDD:288479
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010