Protein Alignment Rbp4 and msi1a

DIOPT Version :10

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001430346.1
• Gene: msi1a / 503755
• ZFINID: ZDB-GENE-050306-36
• Length: 347
• Species: Danio rerio
• Alignment Length: 345
• Identity: 105/345 - (30%)
• Similarity: 142/345 - (41%)
• Gaps: 77/345 - (22%)

  Fly    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTI 97
            |:||||||.|||.|.|:.:|.:||.|.:.:|:||||:..|||||||||||...|:.|.....|.:
Zfish    23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYVDQTGVDKVLAQNRHEL 87

  Fly    98 DNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFGPV 162
            |:|.::.|.|.||:      ....:|         ..:|:||:|||........|::||.|||.|
Zfish    88 DSKTIDPKVAFPRR------AQPKLV---------TRTKKIFVGGLSVNTTIEDVKQYFDQFGKV 137

  Fly   163 ASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRSTQK--------ADRRF 219
            ....|:.|:.|.|.|.|||:.|.:....||......|.|...:||.|::..|        |..|.
Zfish   138 DDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGTARGRS 202

  Fly   220 R-----------------FPIFSS---VRAGYIPPQPATADSYNYNNPNYN----PYLAQSVLPP 260
            |                 :|.|.:   ...||....|    .|.|..|.::    |.|. |..||
Zfish   203 RVMPYGMDAFMLGIGMLGYPGFQAATYASRGYTGITP----GYTYQFPEFHLERTPLLT-STHPP 262

  Fly   261 SAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGPDMW----SSYPKTGIYSAQEWT 321
            .          |...|....|...||:      |...:.|..|..:    |..|...:|:|....
Zfish   263 E----------ITAIPLTAYGPMAAAA------AAAVVRGSTPSRFLGTSSPGPMADLYAAASQE 311

  Fly   322 SS-----KVAEWGPKAGHKH 336
            |:     ..|...|..|..|
Zfish   312 SAVSSYISAASPAPSTGFGH 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	34..105	CDD:473069	36/70 (51%)
		RRM2_hnRNPA_like	137..209	CDD:409766	27/71 (38%)
msi1a	NP_001430346.1	None