Protein Alignment Rbp4 and hnrnpa1

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: XP_012812298.1
• Gene: hnrnpa1 / 496507
• XenbaseID: XB-GENE-493963
• Length: 362
• Species: Xenopus tropicalis
• Alignment Length: 412
• Identity: 112/412 - (27%)
• Similarity: 166/412 - (40%)
• Gaps: 93/412 - (22%)

  Fly    29 EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRAR 93
            |.|||:||||||.:||.|:||..|.|:|.:.|.||:|||.|..|||||||||.....|:....||
 Frog    11 EQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSTDEVDAAMSAR 75

  Fly    94 PHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQ 158
            ||.:|.::||.|.|:.|:|..|.|             ..:..|:||:||:||..:|:.:||||.|
 Frog    76 PHKVDGRVVEPKRAVSREDSSRPG-------------AHLTVKKIFVGGIKEDTEEHHLREYFEQ 127

  Fly   159 FGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRSTQKADRRFRFPI 223
            :|.:..::::.||.:|::|.|.|:.|.|..|.:|.:..:.|.:.....||:::..|.:
 Frog   128 YGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNCEVRKALSKQE------- 185

  Fly   224 FSSVRAGYIPPQPATADSYNYN------NPNYNPYLAQSVLPPSAFTNGWAHYVIPMAPKPTPGQ 282
            .:||...    |.....|.|::      |.|:.
 Frog   186 MASVSGS----QRGRGGSGNFSGRGGFGNDNFG-------------------------------- 214

  Fly   283 NMAASLPSQQLAEHSLNGHGPDMWSSYPKTGIYSAQEWTSSKVAEWGPKAGHKHAQTSTNDRAKI 347
            ....:..|.:.......|:|.|.::.:...|.|......|.....:|...|..:...
 Frog   215 GRGGNFSSNRGGGFGNRGYGGDGYNGFGNDGGYGGSPPYSGGNRGYGGGGGQGYGGG-------- 271

  Fly   348 DLKELQAATFNNKLDFGARGDADRMSGAGLGLGLTGGAAVGVGA-------IKKWPTQDYKVFKP 405
                 |...:.     |..|..|..:|.|.|.|.:||...|.|.       ...:..|....|.|
 Frog   272 -----QGGGYG-----GGNGGYDGYNGGGSGFGGSGGNFGGSGGGGGGYNDFGNYNNQSSSSFGP 326

  Fly   406 AKSPTNGVIPKIGKEATTPPYG 427
            .|.      ...|....:.|||
 Frog   327 MKG------GNYGGGRNSGPYG 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	41/76 (54%)
		RRM2_hnRNPA_like	137..209	CDD:240774	25/71 (35%)
hnrnpa1	XP_012812298.1	RRM1_hnRNPA1	12..92	CDD:241205	43/79 (54%)
		RRM2_hnRNPA1	105..181	CDD:241024	27/75 (36%)
		HnRNPA1	<315..>334	CDD:371635	4/24 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920