Protein Alignment Rbp4 and sap-49

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001379265.1
• Gene: sap-49 / 4363023
• WormBaseID: WBGene00004723
• Length: 388
• Species: Caenorhabditis elegans
• Alignment Length: 298
• Identity: 70/298 - (23%)
• Similarity: 118/298 - (39%)
• Gaps: 80/298 - (26%)

  Fly    34 IFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPK----SVEIVQRARP 94
            |::|||..:.:...|.....|.|.|....:.:|.|:.:.:|||||.::..:    :::|:...:
 Worm    15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIK- 78

  Fly    95 HTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQF 159
              :..|.::...|...:   :...||:               .||:|.|....||.::.:.||.|
 Worm    79 --LYGKPIKVNKASAHE---KNMDVGA---------------NIFVGNLDPEVDEKLLYDTFSAF 123

  Fly   160 GPVASV-KLLMDRETGRQRAFGFLEFVDPSSAEKAL-APRKHWILQTLVEV----KRSTQ----- 213
            |.:..| |::.|.::|..:.|.|:.|....:::.|| |....::....:.|    ||.::
 Worm   124 GVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHG 188

  Fly   214 -KADRRFR-----FP------IFSSVRAGY-------IPPQPATADSYNYNNPNYNP----YLAQ 255
             .|:|...     ||      :||.|..|.       :|...|...::....|.|.|    .:||
 Worm   189 TAAERMLAAQNPLFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQ 253

  Fly   256 SVL----------PPSAFTNGWAHYVIPMAP--KPTPG 281
            |..          |||         |.||.|  .||||
 Worm   254 SGYQGQYPPVPPPPPS---------VTPMPPPMPPTPG 282

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	18/79 (23%)
		RRM2_hnRNPA_like	137..209	CDD:240774	21/77 (27%)
sap-49	NP_001379265.1	RRM1_SF3B4	15..88	CDD:409771	17/75 (23%)
		RRM2_SF3B4	99..181	CDD:409772	23/96 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910